Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Vma21Q78T54 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Vma21Q78T54 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Vma21Q78T54 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm12390-201ENSMUST00000117897 397 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm12058-201ENSMUST00000118614 437 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm13570-201ENSMUST00000140763 309 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm24548-201ENSMUST00000158650 108 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC9.78□□□□□ -0.84
Vma21Q78T54 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Vma21Q78T54 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.78□□□□□ -0.84
Vma21Q78T54 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.78□□□□□ -0.84
Vma21Q78T54 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.78□□□□□ -0.84
Vma21Q78T54 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.78□□□□□ -0.84
Vma21Q78T54 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Vma21Q78T54 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Vma21Q78T54 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.78□□□□□ -0.84
Vma21Q78T54 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Vma21Q78T54 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Vma21Q78T54 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Vma21Q78T54 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Vma21Q78T54 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Vma21Q78T54 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Vma21Q78T54 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.77□□□□□ -0.84
Vma21Q78T54 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Vma21Q78T54 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Vma21Q78T54 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Vma21Q78T54 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Vma21Q78T54 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.77□□□□□ -0.85
Vma21Q78T54 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.77□□□□□ -0.85
Vma21Q78T54 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Gm6222-202ENSMUST00000182143 629 ntBASIC9.77□□□□□ -0.85
Vma21Q78T54 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
Vma21Q78T54 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Vma21Q78T54 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Vma21Q78T54 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms