Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm9062-201ENSMUST00000117712 727 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm13611-201ENSMUST00000118269 318 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm20426-201ENSMUST00000173657 440 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm18038-201ENSMUST00000197900 485 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm7848-201ENSMUST00000210739 718 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Gm19994-201ENSMUST00000217086 586 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Spcs1-203ENSMUST00000226374 592 ntBASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.25□□□□□ -0.61
Shc4Q6S5L9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Gm12176-201ENSMUST00000121420 875 ntBASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Gm23119-201ENSMUST00000158610 140 ntBASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Mir7677-201ENSMUST00000184226 67 ntBASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Gm43962-201ENSMUST00000203898 190 ntBASIC11.25□□□□□ -0.61
Shc4Q6S5L9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Gm17827-201ENSMUST00000211825 742 ntBASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shc4Q6S5L9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms