Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm15528-201ENSMUST00000117821 864 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm12990-201ENSMUST00000120372 468 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm10169-201ENSMUST00000121822 348 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm25492-201ENSMUST00000157383 129 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm43380-201ENSMUST00000200421 220 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm18463-201ENSMUST00000207258 474 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm18460-201ENSMUST00000208088 464 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 AC129308.3-201ENSMUST00000225652 524 ntBASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd4Q6PDQ2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Gm26134-201ENSMUST00000178484 110 ntBASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Gm7741-201ENSMUST00000181445 989 ntBASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd4Q6PDQ2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm26047-201ENSMUST00000157308 113 ntBASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm20392-201ENSMUST00000173047 701 ntBASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm9116-201ENSMUST00000192400 1018 ntBASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm26047-202ENSMUST00000198840 115 ntBASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm42599-201ENSMUST00000201308 469 ntBASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Gm25554-201ENSMUST00000158075 113 ntBASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd4Q6PDQ2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Rab3c-202ENSMUST00000223922 2398 ntBASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Gm26976-201ENSMUST00000182929 908 ntBASIC15.4■□□□□ 0.06
Chd4Q6PDQ2 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms