Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Gm24548-201ENSMUST00000158650 108 ntBASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smarcd3Q6P9Z1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gm14127-201ENSMUST00000117906 678 ntBASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gm18062-201ENSMUST00000208020 547 ntBASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gm18055-201ENSMUST00000208254 547 ntBASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Snora73a-201ENSMUST00000082453 205 ntBASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smarcd3Q6P9Z1 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.02□□□□□ -0.64
Smarcd3Q6P9Z1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms