Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
VclQ64727 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
VclQ64727 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
VclQ64727 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.87□□□□□ -0.51
VclQ64727 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
VclQ64727 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Gm43962-201ENSMUST00000203898 190 ntBASIC11.87□□□□□ -0.51
VclQ64727 Gm45224-201ENSMUST00000208203 414 ntBASIC11.87□□□□□ -0.51
VclQ64727 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VclQ64727 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.87□□□□□ -0.51
VclQ64727 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.87□□□□□ -0.51
VclQ64727 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
VclQ64727 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.87□□□□□ -0.51
VclQ64727 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
VclQ64727 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
VclQ64727 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.86□□□□□ -0.51
VclQ64727 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
VclQ64727 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
VclQ64727 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.86□□□□□ -0.51
VclQ64727 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.86□□□□□ -0.51
VclQ64727 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.86□□□□□ -0.51
VclQ64727 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.86□□□□□ -0.51
VclQ64727 AY036118-201ENSMUST00000200021 923 ntBASIC11.86□□□□□ -0.51
VclQ64727 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.86□□□□□ -0.51
VclQ64727 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.86□□□□□ -0.51
VclQ64727 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.86□□□□□ -0.51
VclQ64727 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.86□□□□□ -0.51
VclQ64727 Gm18730-201ENSMUST00000218038 343 ntBASIC11.86□□□□□ -0.51
VclQ64727 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.86□□□□□ -0.51
VclQ64727 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.86□□□□□ -0.51
VclQ64727 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
VclQ64727 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.86□□□□□ -0.51
VclQ64727 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
VclQ64727 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.86□□□□□ -0.51
VclQ64727 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.86□□□□□ -0.51
VclQ64727 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.86□□□□□ -0.51
VclQ64727 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
VclQ64727 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
VclQ64727 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
VclQ64727 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VclQ64727 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
VclQ64727 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.85□□□□□ -0.51
VclQ64727 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
VclQ64727 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
VclQ64727 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VclQ64727 Gm22133-201ENSMUST00000102082 109 ntBASIC11.85□□□□□ -0.51
VclQ64727 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms