Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sdc3Q64519 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.63□□□□□ -0.55
Sdc3Q64519 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.63□□□□□ -0.55
Sdc3Q64519 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sdc3Q64519 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sdc3Q64519 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sdc3Q64519 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sdc3Q64519 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sdc3Q64519 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Sdc3Q64519 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sdc3Q64519 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sdc3Q64519 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sdc3Q64519 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sdc3Q64519 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Sdc3Q64519 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.62□□□□□ -0.55
Sdc3Q64519 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sdc3Q64519 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.62□□□□□ -0.55
Sdc3Q64519 Mir5132-201ENSMUST00000175166 71 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 Mir6927-201ENSMUST00000184494 71 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 Gm7003-201ENSMUST00000195089 312 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 Gm45433-201ENSMUST00000209386 247 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.62□□□□□ -0.55
Sdc3Q64519 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sdc3Q64519 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Sdc3Q64519 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.62□□□□□ -0.55
Sdc3Q64519 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.62□□□□□ -0.55
Sdc3Q64519 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Sdc3Q64519 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sdc3Q64519 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Gm14644-201ENSMUST00000116671 647 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 Gm11989-201ENSMUST00000117240 672 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Gm13996-201ENSMUST00000118456 430 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 Gm11362-201ENSMUST00000118838 850 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 Gm12217-201ENSMUST00000118858 696 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 Gm26461-201ENSMUST00000175064 290 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Gm19187-201ENSMUST00000206781 892 ntBASIC11.61□□□□□ -0.55
Sdc3Q64519 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Sdc3Q64519 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sdc3Q64519 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms