Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.25□□□□□ -0.61
Sox17Q61473 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.25□□□□□ -0.61
Sox17Q61473 Gm22331-201ENSMUST00000158066 136 ntBASIC11.25□□□□□ -0.61
Sox17Q61473 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Gm8652-201ENSMUST00000181363 964 ntBASIC11.25□□□□□ -0.61
Sox17Q61473 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Gm44958-201ENSMUST00000203734 736 ntBASIC11.25□□□□□ -0.61
Sox17Q61473 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.25□□□□□ -0.61
Sox17Q61473 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox17Q61473 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.25□□□□□ -0.61
Sox17Q61473 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox17Q61473 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.25□□□□□ -0.61
Sox17Q61473 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sox17Q61473 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Sox17Q61473 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox17Q61473 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Sox17Q61473 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.24□□□□□ -0.61
Sox17Q61473 Gm12314-201ENSMUST00000118104 538 ntBASIC11.24□□□□□ -0.61
Sox17Q61473 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.24□□□□□ -0.61
Sox17Q61473 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.24□□□□□ -0.61
Sox17Q61473 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Sox17Q61473 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 Gm29705-201ENSMUST00000212598 474 ntBASIC11.24□□□□□ -0.61
Sox17Q61473 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Sox17Q61473 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox17Q61473 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox17Q61473 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sox17Q61473 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sox17Q61473 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.23□□□□□ -0.61
Sox17Q61473 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox17Q61473 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Sox17Q61473 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox17Q61473 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox17Q61473 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox17Q61473 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox17Q61473 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Sox17Q61473 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 Gm12091-201ENSMUST00000146791 830 ntBASIC11.23□□□□□ -0.61
Sox17Q61473 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Sox17Q61473 Gm4271-201ENSMUST00000174444 973 ntBASIC11.23□□□□□ -0.61
Sox17Q61473 Gm24196-201ENSMUST00000179161 110 ntBASIC11.23□□□□□ -0.61
Sox17Q61473 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.23□□□□□ -0.61
Sox17Q61473 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.23□□□□□ -0.61
Sox17Q61473 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox17Q61473 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms