Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.19□□□□□ -0.3
Cln3Q61124 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Gm26013-201ENSMUST00000104404 119 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.19□□□□□ -0.3
Cln3Q61124 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.19□□□□□ -0.3
Cln3Q61124 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 Gm22119-201ENSMUST00000175594 99 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.19□□□□□ -0.3
Cln3Q61124 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cln3Q61124 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.19□□□□□ -0.3
Cln3Q61124 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cln3Q61124 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cln3Q61124 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cln3Q61124 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cln3Q61124 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Map1b-203ENSMUST00000223725 2669 ntBASIC13.19□□□□□ -0.3
Cln3Q61124 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cln3Q61124 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cln3Q61124 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.18□□□□□ -0.3
Cln3Q61124 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.18□□□□□ -0.3
Cln3Q61124 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cln3Q61124 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm11783-201ENSMUST00000119549 885 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 Gm7150-201ENSMUST00000122032 981 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.18□□□□□ -0.3
Cln3Q61124 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 Gm8531-201ENSMUST00000188319 893 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm17877-201ENSMUST00000192578 814 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 Gm6450-201ENSMUST00000200896 574 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm45359-201ENSMUST00000210635 427 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.18□□□□□ -0.3
Cln3Q61124 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.18□□□□□ -0.3
Cln3Q61124 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cln3Q61124 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cln3Q61124 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.18□□□□□ -0.3
Cln3Q61124 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cln3Q61124 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.18□□□□□ -0.3
Cln3Q61124 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.18□□□□□ -0.3
Cln3Q61124 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cln3Q61124 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cln3Q61124 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cln3Q61124 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cln3Q61124 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cln3Q61124 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.17□□□□□ -0.3
Cln3Q61124 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms