Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Satb1Q60611 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.59□□□□□ -0.39
Satb1Q60611 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.59□□□□□ -0.39
Satb1Q60611 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Satb1Q60611 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Satb1Q60611 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Satb1Q60611 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Satb1Q60611 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Satb1Q60611 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Satb1Q60611 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.58□□□□□ -0.4
Satb1Q60611 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Satb1Q60611 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.58□□□□□ -0.4
Satb1Q60611 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.58□□□□□ -0.4
Satb1Q60611 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.58□□□□□ -0.4
Satb1Q60611 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.58□□□□□ -0.4
Satb1Q60611 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Satb1Q60611 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.58□□□□□ -0.4
Satb1Q60611 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Satb1Q60611 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.58□□□□□ -0.4
Satb1Q60611 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Satb1Q60611 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.57□□□□□ -0.4
Satb1Q60611 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.57□□□□□ -0.4
Satb1Q60611 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Satb1Q60611 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Satb1Q60611 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Gm22138-201ENSMUST00000158748 128 ntBASIC12.57□□□□□ -0.4
Satb1Q60611 Gm5616-201ENSMUST00000165252 384 ntBASIC12.57□□□□□ -0.4
Satb1Q60611 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.57□□□□□ -0.4
Satb1Q60611 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.57□□□□□ -0.4
Satb1Q60611 Gm8741-201ENSMUST00000174736 384 ntBASIC12.57□□□□□ -0.4
Satb1Q60611 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Mir6923-201ENSMUST00000184592 72 ntBASIC12.57□□□□□ -0.4
Satb1Q60611 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Satb1Q60611 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.57□□□□□ -0.4
Satb1Q60611 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.57□□□□□ -0.4
Satb1Q60611 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Satb1Q60611 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.57□□□□□ -0.4
Satb1Q60611 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.57□□□□□ -0.4
Satb1Q60611 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.57□□□□□ -0.4
Satb1Q60611 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Satb1Q60611 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Satb1Q60611 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.57□□□□□ -0.4
Satb1Q60611 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Satb1Q60611 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Satb1Q60611 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Satb1Q60611 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Satb1Q60611 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms