Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm24934-201ENSMUST00000103764 111 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm14832-201ENSMUST00000121289 322 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm25668-201ENSMUST00000157700 129 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm7584-201ENSMUST00000175829 940 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Mir6420-201ENSMUST00000185032 102 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Syne3Q4FZC9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Gm42937-201ENSMUST00000197360 752 ntBASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syne3Q4FZC9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syne3Q4FZC9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syne3Q4FZC9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms