Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Gm38151-201ENSMUST00000195085 289 ntBASIC11.04□□□□□ -0.64
Spg11Q3UHA3 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.04□□□□□ -0.64
Spg11Q3UHA3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm16209-201ENSMUST00000118457 627 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm16210-201ENSMUST00000122161 610 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm10171-201ENSMUST00000126220 628 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm38233-201ENSMUST00000194259 807 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm38135-201ENSMUST00000195068 502 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm10233-201ENSMUST00000089275 628 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Mir598-201ENSMUST00000102094 79 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm25492-201ENSMUST00000157383 129 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm7765-201ENSMUST00000182585 974 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Gm5291-201ENSMUST00000201965 899 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Olfr584-201ENSMUST00000098210 964 ntBASIC11.03□□□□□ -0.64
Spg11Q3UHA3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.02□□□□□ -0.64
Spg11Q3UHA3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Spg11Q3UHA3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Mir1941-201ENSMUST00000157834 83 ntBASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Gm7504-201ENSMUST00000201449 424 ntBASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Gm26782-203ENSMUST00000227103 751 ntBASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Spg11Q3UHA3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms