Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43aQ3TL54 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Gm23912-201ENSMUST00000104687 87 ntBASIC12.77□□□□□ -0.37
Trim43aQ3TL54 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Gm13392-201ENSMUST00000117708 150 ntBASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Gm13342-201ENSMUST00000121055 207 ntBASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Gm5904-201ENSMUST00000210286 865 ntBASIC12.77□□□□□ -0.37
Trim43aQ3TL54 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.77□□□□□ -0.37
Trim43aQ3TL54 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Gm10268-201ENSMUST00000085340 555 ntBASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Trim43aQ3TL54 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Gm5187-201ENSMUST00000117317 991 ntBASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Gm27682-201ENSMUST00000183930 110 ntBASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43aQ3TL54 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Gm42693-201ENSMUST00000196779 631 ntBASIC12.75□□□□□ -0.37
Trim43aQ3TL54 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.75□□□□□ -0.37
Trim43aQ3TL54 Snora73a-201ENSMUST00000082453 205 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms