Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm17931-201ENSMUST00000208132 634 ntBASIC6.15□□□□□ -1.43
Ush2AQ2QI47 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC6.15□□□□□ -1.43
Ush2AQ2QI47 AC108416.3-201ENSMUST00000226148 557 ntBASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm44260-201ENSMUST00000204946 2094 ntBASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Dcstamp-205ENSMUST00000228556 1684 ntBASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm44975-201ENSMUST00000207435 1390 ntBASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC6.15□□□□□ -1.43
Ush2AQ2QI47 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm15793-201ENSMUST00000121857 495 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm27833-201ENSMUST00000184285 124 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm27953-201ENSMUST00000185171 143 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm43858-201ENSMUST00000199418 1778 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm45212-201ENSMUST00000205831 3403 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm5639-201ENSMUST00000122305 2403 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 CT030166.5-201ENSMUST00000222249 420 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm42499-201ENSMUST00000196193 1412 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm12529-201ENSMUST00000119529 268 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm16329-201ENSMUST00000148174 371 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm44420-201ENSMUST00000203669 490 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm12626-201ENSMUST00000117339 1983 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm13543-201ENSMUST00000121230 796 ntBASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ush2AQ2QI47 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms