Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm26047-202ENSMUST00000198840 115 ntBASIC11.56□□□□□ -0.56
Hoxc4Q08624 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Gm43916-201ENSMUST00000205062 967 ntBASIC11.56□□□□□ -0.56
Hoxc4Q08624 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.56□□□□□ -0.56
Hoxc4Q08624 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxc4Q08624 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.55□□□□□ -0.56
Hoxc4Q08624 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Gm12176-201ENSMUST00000121420 875 ntBASIC11.55□□□□□ -0.56
Hoxc4Q08624 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.55□□□□□ -0.56
Hoxc4Q08624 Mir6546-201ENSMUST00000184460 62 ntBASIC11.55□□□□□ -0.56
Hoxc4Q08624 Gm3508-201ENSMUST00000186012 792 ntBASIC11.55□□□□□ -0.56
Hoxc4Q08624 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.55□□□□□ -0.56
Hoxc4Q08624 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.55□□□□□ -0.56
Hoxc4Q08624 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.55□□□□□ -0.56
Hoxc4Q08624 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.55□□□□□ -0.56
Hoxc4Q08624 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxc4Q08624 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm11783-201ENSMUST00000119549 885 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Mir3547-201ENSMUST00000175461 88 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm10807-201ENSMUST00000177134 795 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm28937-201ENSMUST00000185413 695 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm29400-201ENSMUST00000187208 695 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm28662-201ENSMUST00000188446 695 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm28251-201ENSMUST00000188835 695 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm37318-201ENSMUST00000194325 695 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm38017-201ENSMUST00000194768 695 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm37287-201ENSMUST00000195449 695 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm37793-201ENSMUST00000195548 695 ntBASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hoxc4Q08624 Gm45770-201ENSMUST00000212105 616 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms