Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cacna1aP97445 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cacna1aP97445 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm24844-201ENSMUST00000158679 127 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cacna1aP97445 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm1848-201ENSMUST00000120711 789 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm12516-201ENSMUST00000120819 385 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm26368-201ENSMUST00000157826 118 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm15744-201ENSMUST00000161734 213 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm5100-201ENSMUST00000195631 589 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm42433-201ENSMUST00000196806 940 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm5714-201ENSMUST00000197343 566 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm45310-201ENSMUST00000210436 275 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.13□□□□□ -0.63
Cacna1aP97445 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.13□□□□□ -0.63
Cacna1aP97445 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cacna1aP97445 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cacna1aP97445 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.12□□□□□ -0.63
Cacna1aP97445 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm17877-201ENSMUST00000192578 814 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.12□□□□□ -0.63
Cacna1aP97445 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cacna1aP97445 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms