Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ThraP63058 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ThraP63058 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ThraP63058 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ThraP63058 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ThraP63058 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ThraP63058 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ThraP63058 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ThraP63058 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ThraP63058 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ThraP63058 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ThraP63058 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ThraP63058 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.22□□□□□ -0.45
ThraP63058 Cog3-203ENSMUST00000227473 4197 ntBASIC12.22□□□□□ -0.45
ThraP63058 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
ThraP63058 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.22□□□□□ -0.45
ThraP63058 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.22□□□□□ -0.45
ThraP63058 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Gm14277-201ENSMUST00000121195 360 ntBASIC12.22□□□□□ -0.45
ThraP63058 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Gm26361-201ENSMUST00000158868 186 ntBASIC12.22□□□□□ -0.45
ThraP63058 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.22□□□□□ -0.45
ThraP63058 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.22□□□□□ -0.45
ThraP63058 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
ThraP63058 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ThraP63058 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
ThraP63058 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.22□□□□□ -0.45
ThraP63058 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.22□□□□□ -0.45
ThraP63058 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ThraP63058 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.21□□□□□ -0.45
ThraP63058 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.21□□□□□ -0.45
ThraP63058 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ThraP63058 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.21□□□□□ -0.45
ThraP63058 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ThraP63058 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
ThraP63058 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
ThraP63058 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.21□□□□□ -0.45
ThraP63058 Gm4909-201ENSMUST00000118749 794 ntBASIC12.21□□□□□ -0.45
ThraP63058 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.21□□□□□ -0.45
ThraP63058 Gm14760-201ENSMUST00000121831 999 ntBASIC12.21□□□□□ -0.45
ThraP63058 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.21□□□□□ -0.45
ThraP63058 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.21□□□□□ -0.45
ThraP63058 Gm16296-201ENSMUST00000159905 325 ntBASIC12.21□□□□□ -0.45
ThraP63058 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.21□□□□□ -0.45
ThraP63058 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.21□□□□□ -0.45
ThraP63058 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
ThraP63058 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ThraP63058 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.21□□□□□ -0.45
ThraP63058 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.21□□□□□ -0.45
ThraP63058 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.21□□□□□ -0.45
ThraP63058 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ThraP63058 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ThraP63058 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.21□□□□□ -0.46
ThraP63058 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms