Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Tpm1P58771 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.41□□□□□ -0.26
Tpm1P58771 Gm22331-201ENSMUST00000158066 136 ntBASIC13.41□□□□□ -0.26
Tpm1P58771 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Gm8018-201ENSMUST00000173536 789 ntBASIC13.41□□□□□ -0.26
Tpm1P58771 Gm4271-201ENSMUST00000174444 973 ntBASIC13.41□□□□□ -0.26
Tpm1P58771 Gm24196-201ENSMUST00000179161 110 ntBASIC13.41□□□□□ -0.26
Tpm1P58771 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.41□□□□□ -0.26
Tpm1P58771 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.41□□□□□ -0.26
Tpm1P58771 Gm44958-201ENSMUST00000203734 736 ntBASIC13.41□□□□□ -0.26
Tpm1P58771 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.41□□□□□ -0.26
Tpm1P58771 Gm29705-201ENSMUST00000212598 474 ntBASIC13.41□□□□□ -0.26
Tpm1P58771 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.41□□□□□ -0.26
Tpm1P58771 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.41□□□□□ -0.26
Tpm1P58771 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tpm1P58771 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.41□□□□□ -0.26
Tpm1P58771 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm1P58771 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
Tpm1P58771 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tpm1P58771 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tpm1P58771 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.4□□□□□ -0.26
Tpm1P58771 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.4□□□□□ -0.26
Tpm1P58771 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.4□□□□□ -0.26
Tpm1P58771 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.4□□□□□ -0.26
Tpm1P58771 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.4□□□□□ -0.26
Tpm1P58771 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.4□□□□□ -0.26
Tpm1P58771 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm6244-201ENSMUST00000178732 841 ntBASIC13.4□□□□□ -0.26
Tpm1P58771 Gm18304-201ENSMUST00000189162 546 ntBASIC13.4□□□□□ -0.26
Tpm1P58771 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.4□□□□□ -0.26
Tpm1P58771 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm10012-201ENSMUST00000078252 192 ntBASIC13.4□□□□□ -0.26
Tpm1P58771 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.4□□□□□ -0.26
Tpm1P58771 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.4□□□□□ -0.26
Tpm1P58771 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm1P58771 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tpm1P58771 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.4□□□□□ -0.27
Tpm1P58771 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Tpm1P58771 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tpm1P58771 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tpm1P58771 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tpm1P58771 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.39□□□□□ -0.27
Tpm1P58771 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.39□□□□□ -0.27
Tpm1P58771 Gm11814-201ENSMUST00000119515 929 ntBASIC13.39□□□□□ -0.27
Tpm1P58771 Gm13315-201ENSMUST00000120376 991 ntBASIC13.39□□□□□ -0.27
Tpm1P58771 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.39□□□□□ -0.27
Tpm1P58771 Gm23119-201ENSMUST00000158610 140 ntBASIC13.39□□□□□ -0.27
Tpm1P58771 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm1P58771 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms