Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Abcd3P55096 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Abcd3P55096 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Abcd3P55096 Gm12015-201ENSMUST00000117065 843 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Gm15610-201ENSMUST00000120584 195 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Gm14726-201ENSMUST00000120623 896 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Gm7722-201ENSMUST00000120646 741 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.78□□□□□ -0.68
Abcd3P55096 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.78□□□□□ -0.68
Abcd3P55096 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.78□□□□□ -0.68
Abcd3P55096 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.78□□□□□ -0.68
Abcd3P55096 Gm27516-201ENSMUST00000184237 98 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Gm31256-201ENSMUST00000194705 506 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Gm6334-201ENSMUST00000207083 228 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.78□□□□□ -0.68
Abcd3P55096 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.78□□□□□ -0.68
Abcd3P55096 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Abcd3P55096 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Abcd3P55096 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.78□□□□□ -0.68
Abcd3P55096 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Abcd3P55096 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Abcd3P55096 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Abcd3P55096 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Abcd3P55096 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Abcd3P55096 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Abcd3P55096 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.77□□□□□ -0.69
Abcd3P55096 Gm11989-201ENSMUST00000117240 672 ntBASIC10.77□□□□□ -0.69
Abcd3P55096 Gm11362-201ENSMUST00000118838 850 ntBASIC10.77□□□□□ -0.69
Abcd3P55096 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Abcd3P55096 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.77□□□□□ -0.69
Abcd3P55096 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Abcd3P55096 Gm19187-201ENSMUST00000206781 892 ntBASIC10.77□□□□□ -0.69
Abcd3P55096 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.77□□□□□ -0.69
Abcd3P55096 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.77□□□□□ -0.69
Abcd3P55096 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Cts7-204ENSMUST00000225321 1257 ntBASIC10.77□□□□□ -0.69
Abcd3P55096 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.77□□□□□ -0.69
Abcd3P55096 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Abcd3P55096 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Abcd3P55096 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.77□□□□□ -0.69
Abcd3P55096 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.77□□□□□ -0.69
Abcd3P55096 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Abcd3P55096 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.77□□□□□ -0.69
Abcd3P55096 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Abcd3P55096 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.76□□□□□ -0.69
Abcd3P55096 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Abcd3P55096 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Abcd3P55096 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Abcd3P55096 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Abcd3P55096 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms