Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm25355-201ENSMUST00000178456 101 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm24975-201ENSMUST00000178492 101 ntBASIC12.64□□□□□ -0.39
NcanP55066 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.64□□□□□ -0.39
NcanP55066 Gm23189-201ENSMUST00000178954 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm25100-201ENSMUST00000179750 101 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm23064-201ENSMUST00000179866 101 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm5706-201ENSMUST00000181525 993 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm2474-201ENSMUST00000195162 559 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm37197-201ENSMUST00000195607 401 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm42430-201ENSMUST00000197209 616 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm7504-201ENSMUST00000201449 424 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm45094-201ENSMUST00000207013 617 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm44814-201ENSMUST00000207018 434 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.64□□□□□ -0.39
NcanP55066 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.64□□□□□ -0.39
NcanP55066 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.64□□□□□ -0.39
NcanP55066 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.64□□□□□ -0.39
NcanP55066 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NcanP55066 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NcanP55066 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
NcanP55066 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.63□□□□□ -0.39
NcanP55066 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
NcanP55066 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
NcanP55066 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.63□□□□□ -0.39
NcanP55066 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC12.63□□□□□ -0.39
NcanP55066 Gm24078-201ENSMUST00000158184 103 ntBASIC12.63□□□□□ -0.39
NcanP55066 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.63□□□□□ -0.39
NcanP55066 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NcanP55066 Gm9162-201ENSMUST00000182081 991 ntBASIC12.63□□□□□ -0.39
NcanP55066 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Gm43671-201ENSMUST00000200422 433 ntBASIC12.63□□□□□ -0.39
NcanP55066 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.63□□□□□ -0.39
NcanP55066 Gm17931-201ENSMUST00000208132 634 ntBASIC12.63□□□□□ -0.39
NcanP55066 Gm18256-201ENSMUST00000209087 907 ntBASIC12.63□□□□□ -0.39
NcanP55066 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.63□□□□□ -0.39
NcanP55066 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
NcanP55066 Gm7940-201ENSMUST00000218195 769 ntBASIC12.63□□□□□ -0.39
NcanP55066 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.63□□□□□ -0.39
NcanP55066 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.63□□□□□ -0.39
NcanP55066 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NcanP55066 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.63□□□□□ -0.39
NcanP55066 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.63□□□□□ -0.39
NcanP55066 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NcanP55066 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NcanP55066 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.63□□□□□ -0.39
NcanP55066 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.63□□□□□ -0.39
NcanP55066 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.63□□□□□ -0.39
NcanP55066 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NcanP55066 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NcanP55066 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
NcanP55066 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.62□□□□□ -0.39
NcanP55066 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.62□□□□□ -0.39
NcanP55066 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.62□□□□□ -0.39
NcanP55066 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
NcanP55066 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NcanP55066 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NcanP55066 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.62□□□□□ -0.39
NcanP55066 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Gm9673-201ENSMUST00000119287 781 ntBASIC12.62□□□□□ -0.39
NcanP55066 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms