Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.93□□□□□ -0.82
Cdkn1aP39689 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Gm22902-201ENSMUST00000158488 302 ntBASIC9.93□□□□□ -0.82
Cdkn1aP39689 Gm23699-201ENSMUST00000158835 135 ntBASIC9.93□□□□□ -0.82
Cdkn1aP39689 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Gm8343-201ENSMUST00000182705 994 ntBASIC9.93□□□□□ -0.82
Cdkn1aP39689 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.93□□□□□ -0.82
Cdkn1aP39689 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cdkn1aP39689 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm38355-201ENSMUST00000192514 1570 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm9062-201ENSMUST00000117712 727 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm13611-201ENSMUST00000118269 318 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm15610-201ENSMUST00000120584 195 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm27530-201ENSMUST00000184096 98 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm18893-201ENSMUST00000198416 943 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm9555-201ENSMUST00000200908 583 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gm44100-201ENSMUST00000204329 436 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.92□□□□□ -0.82
Cdkn1aP39689 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cdkn1aP39689 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.91□□□□□ -0.82
Cdkn1aP39689 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms