Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox5P35710 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox5P35710 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox5P35710 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sox5P35710 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox5P35710 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sox5P35710 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox5P35710 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox5P35710 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox5P35710 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox5P35710 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox5P35710 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sox5P35710 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox5P35710 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.11□□□□□ -0.31
Sox5P35710 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox5P35710 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Sox5P35710 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Sox5P35710 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox5P35710 Gm2546-201ENSMUST00000182630 991 ntBASIC13.11□□□□□ -0.31
Sox5P35710 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox5P35710 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.11□□□□□ -0.31
Sox5P35710 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox5P35710 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox5P35710 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.11□□□□□ -0.31
Sox5P35710 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.11□□□□□ -0.31
Sox5P35710 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox5P35710 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.11□□□□□ -0.31
Sox5P35710 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Sox5P35710 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.11□□□□□ -0.31
Sox5P35710 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox5P35710 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Sox5P35710 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.1□□□□□ -0.31
Sox5P35710 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox5P35710 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Gm14660-201ENSMUST00000119809 575 ntBASIC13.1□□□□□ -0.31
Sox5P35710 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox5P35710 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Sox5P35710 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.1□□□□□ -0.31
Sox5P35710 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox5P35710 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox5P35710 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Gm9996-201ENSMUST00000070359 913 ntBASIC13.1□□□□□ -0.31
Sox5P35710 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.1□□□□□ -0.31
Sox5P35710 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Sox5P35710 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox5P35710 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox5P35710 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.1□□□□□ -0.31
Sox5P35710 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.1□□□□□ -0.31
Sox5P35710 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox5P35710 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox5P35710 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox5P35710 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox5P35710 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox5P35710 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox5P35710 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox5P35710 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox5P35710 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox5P35710 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox5P35710 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox5P35710 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms