Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Nfkb1P25799 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nfkb1P25799 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.4□□□□□ -0.42
Nfkb1P25799 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.43
Nfkb1P25799 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nfkb1P25799 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Gm23251-201ENSMUST00000103773 110 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Gm7851-201ENSMUST00000117574 323 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Gm13045-201ENSMUST00000119019 712 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.39□□□□□ -0.43
Nfkb1P25799 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Gm8343-201ENSMUST00000182705 994 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Gm4034-201ENSMUST00000187674 480 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.39□□□□□ -0.43
Nfkb1P25799 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nfkb1P25799 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nfkb1P25799 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Nfkb1P25799 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nfkb1P25799 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nfkb1P25799 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm12165-201ENSMUST00000117047 342 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm11941-201ENSMUST00000119904 610 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.38□□□□□ -0.43
Nfkb1P25799 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm9211-201ENSMUST00000182882 975 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm37246-201ENSMUST00000192665 835 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm4482-201ENSMUST00000200876 742 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm8956-201ENSMUST00000203939 825 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm1821-202ENSMUST00000227415 750 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 Ntng1-201ENSMUST00000051253 327 ntBASIC12.38□□□□□ -0.43
Nfkb1P25799 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nfkb1P25799 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms