Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Sdc1P18828 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.82□□□□□ -0.84
Sdc1P18828 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.82□□□□□ -0.84
Sdc1P18828 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.82□□□□□ -0.84
Sdc1P18828 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.82□□□□□ -0.84
Sdc1P18828 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.82□□□□□ -0.84
Sdc1P18828 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Sdc1P18828 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.82□□□□□ -0.84
Sdc1P18828 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Sdc1P18828 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Sdc1P18828 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.81□□□□□ -0.84
Sdc1P18828 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.81□□□□□ -0.84
Sdc1P18828 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Sdc1P18828 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.81□□□□□ -0.84
Sdc1P18828 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.81□□□□□ -0.84
Sdc1P18828 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.81□□□□□ -0.84
Sdc1P18828 Gm27243-201ENSMUST00000183964 521 ntBASIC9.81□□□□□ -0.84
Sdc1P18828 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.81□□□□□ -0.84
Sdc1P18828 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.81□□□□□ -0.84
Sdc1P18828 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.81□□□□□ -0.84
Sdc1P18828 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Sdc1P18828 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Sdc1P18828 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Sdc1P18828 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Sdc1P18828 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.81□□□□□ -0.84
Sdc1P18828 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Sdc1P18828 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Sdc1P18828 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Sdc1P18828 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Sdc1P18828 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Sdc1P18828 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Sdc1P18828 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Sdc1P18828 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Sdc1P18828 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Sdc1P18828 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Sdc1P18828 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms