Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Gm44647-201ENSMUST00000207402 428 ntBASIC13.94□□□□□ -0.18
Col1a1P11087 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Col1a1P11087 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.94□□□□□ -0.18
Col1a1P11087 Gm39288-201ENSMUST00000210554 446 ntBASIC13.94□□□□□ -0.18
Col1a1P11087 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.94□□□□□ -0.18
Col1a1P11087 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.94□□□□□ -0.18
Col1a1P11087 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.94□□□□□ -0.18
Col1a1P11087 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.94□□□□□ -0.18
Col1a1P11087 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col1a1P11087 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Col1a1P11087 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col1a1P11087 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.94□□□□□ -0.18
Col1a1P11087 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.94□□□□□ -0.18
Col1a1P11087 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col1a1P11087 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col1a1P11087 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm11560-201ENSMUST00000117567 948 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm22379-201ENSMUST00000157480 131 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col1a1P11087 Mir8093-201ENSMUST00000185043 137 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm43380-201ENSMUST00000200421 220 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.93□□□□□ -0.18
Col1a1P11087 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col1a1P11087 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col1a1P11087 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.93□□□□□ -0.18
Col1a1P11087 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 Gm15003-201ENSMUST00000118884 446 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 Gm12791-201ENSMUST00000120788 655 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.93□□□□□ -0.18
Col1a1P11087 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.93□□□□□ -0.18
Col1a1P11087 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Col1a1P11087 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.93□□□□□ -0.18
Col1a1P11087 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.93□□□□□ -0.18
Col1a1P11087 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.93□□□□□ -0.18
Col1a1P11087 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col1a1P11087 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.92□□□□□ -0.18
Col1a1P11087 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
Col1a1P11087 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.92□□□□□ -0.18
Col1a1P11087 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.92□□□□□ -0.18
Col1a1P11087 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col1a1P11087 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 344 ms