Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.86□□□□□ -0.51
Hoxa4P06798 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.86□□□□□ -0.51
Hoxa4P06798 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hoxa4P06798 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.86□□□□□ -0.51
Hoxa4P06798 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa4P06798 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Gm28450-201ENSMUST00000187349 638 ntBASIC11.85□□□□□ -0.51
Hoxa4P06798 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Gm19208-201ENSMUST00000213861 912 ntBASIC11.85□□□□□ -0.51
Hoxa4P06798 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.85□□□□□ -0.51
Hoxa4P06798 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa4P06798 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa4P06798 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxa4P06798 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxa4P06798 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxa4P06798 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxa4P06798 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Hoxa4P06798 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa4P06798 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm25881-201ENSMUST00000157783 103 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm23085-201ENSMUST00000157849 293 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm18734-201ENSMUST00000172937 808 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm8100-201ENSMUST00000182906 988 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm9136-201ENSMUST00000193368 454 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm4482-201ENSMUST00000200876 742 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxa4P06798 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm21811-201ENSMUST00000096485 930 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Hoxa4P06798 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa4P06798 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxa4P06798 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.84□□□□□ -0.51
Hoxa4P06798 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms