Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
P01852 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.04□□□□□ -0.64
P01852 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.04□□□□□ -0.64
P01852 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.04□□□□□ -0.64
P01852 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.04□□□□□ -0.64
P01852 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P01852 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.04□□□□□ -0.64
P01852 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
P01852 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P01852 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P01852 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.04□□□□□ -0.64
P01852 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.04□□□□□ -0.64
P01852 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.04□□□□□ -0.64
P01852 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.04□□□□□ -0.64
P01852 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
P01852 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01852 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.04□□□□□ -0.64
P01852 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
P01852 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.03□□□□□ -0.64
P01852 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.03□□□□□ -0.64
P01852 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Gm15236-201ENSMUST00000117309 379 ntBASIC11.03□□□□□ -0.64
P01852 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.03□□□□□ -0.64
P01852 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
P01852 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.03□□□□□ -0.64
P01852 Gm4034-201ENSMUST00000187674 480 ntBASIC11.03□□□□□ -0.64
P01852 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.03□□□□□ -0.64
P01852 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.03□□□□□ -0.64
P01852 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.03□□□□□ -0.64
P01852 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.03□□□□□ -0.64
P01852 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.03□□□□□ -0.64
P01852 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
P01852 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.03□□□□□ -0.64
P01852 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01852 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
P01852 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
P01852 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P01852 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P01852 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.02□□□□□ -0.64
P01852 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.02□□□□□ -0.64
P01852 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
P01852 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.02□□□□□ -0.64
P01852 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
P01852 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
P01852 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
P01852 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.02□□□□□ -0.65
P01852 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P01852 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
P01852 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
P01852 Gm2383-201ENSMUST00000181461 807 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms