Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.33□□□□□ -0.59
Matn4O89029 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Matn4O89029 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Matn4O89029 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.33□□□□□ -0.6
Matn4O89029 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.33□□□□□ -0.6
Matn4O89029 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.33□□□□□ -0.6
Matn4O89029 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.33□□□□□ -0.6
Matn4O89029 Gm14832-201ENSMUST00000121289 322 ntBASIC11.33□□□□□ -0.6
Matn4O89029 Gm24845-201ENSMUST00000158034 109 ntBASIC11.33□□□□□ -0.6
Matn4O89029 Gm25043-201ENSMUST00000158604 212 ntBASIC11.33□□□□□ -0.6
Matn4O89029 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.33□□□□□ -0.6
Matn4O89029 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.33□□□□□ -0.6
Matn4O89029 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.33□□□□□ -0.6
Matn4O89029 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Matn4O89029 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Matn4O89029 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Matn4O89029 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.33□□□□□ -0.6
Matn4O89029 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.33□□□□□ -0.6
Matn4O89029 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.33□□□□□ -0.6
Matn4O89029 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Matn4O89029 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Matn4O89029 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Matn4O89029 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Matn4O89029 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Matn4O89029 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Matn4O89029 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.32□□□□□ -0.6
Matn4O89029 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.32□□□□□ -0.6
Matn4O89029 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Matn4O89029 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Gm11439-201ENSMUST00000118598 409 ntBASIC11.32□□□□□ -0.6
Matn4O89029 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.32□□□□□ -0.6
Matn4O89029 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.32□□□□□ -0.6
Matn4O89029 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.32□□□□□ -0.6
Matn4O89029 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.32□□□□□ -0.6
Matn4O89029 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.32□□□□□ -0.6
Matn4O89029 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Matn4O89029 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.32□□□□□ -0.6
Matn4O89029 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.32□□□□□ -0.6
Matn4O89029 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.32□□□□□ -0.6
Matn4O89029 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Matn4O89029 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.32□□□□□ -0.6
Matn4O89029 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.32□□□□□ -0.6
Matn4O89029 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Matn4O89029 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Matn4O89029 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Matn4O89029 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn4O89029 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn4O89029 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Matn4O89029 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.31□□□□□ -0.6
Matn4O89029 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn4O89029 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Matn4O89029 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms