Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Syn1O88935 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Syn1O88935 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Syn1O88935 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Syn1O88935 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Syn1O88935 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Syn1O88935 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.43□□□□□ -0.42
Syn1O88935 Gm8731-201ENSMUST00000118088 412 ntBASIC12.43□□□□□ -0.42
Syn1O88935 Gm11511-201ENSMUST00000118146 540 ntBASIC12.43□□□□□ -0.42
Syn1O88935 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.43□□□□□ -0.42
Syn1O88935 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.43□□□□□ -0.42
Syn1O88935 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Syn1O88935 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Syn1O88935 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.43□□□□□ -0.42
Syn1O88935 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.43□□□□□ -0.42
Syn1O88935 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Syn1O88935 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Syn1O88935 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Syn1O88935 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Syn1O88935 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syn1O88935 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Syn1O88935 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.42□□□□□ -0.42
Syn1O88935 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syn1O88935 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Gm14807-201ENSMUST00000116640 983 ntBASIC12.42□□□□□ -0.42
Syn1O88935 Gm12579-201ENSMUST00000118040 783 ntBASIC12.42□□□□□ -0.42
Syn1O88935 Gm13019-201ENSMUST00000120000 276 ntBASIC12.42□□□□□ -0.42
Syn1O88935 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.42□□□□□ -0.42
Syn1O88935 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.42□□□□□ -0.42
Syn1O88935 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Gm8723-201ENSMUST00000166076 820 ntBASIC12.42□□□□□ -0.42
Syn1O88935 Gm8701-201ENSMUST00000169259 874 ntBASIC12.42□□□□□ -0.42
Syn1O88935 Gm42511-201ENSMUST00000196160 234 ntBASIC12.42□□□□□ -0.42
Syn1O88935 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syn1O88935 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.42□□□□□ -0.42
Syn1O88935 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Syn1O88935 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syn1O88935 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.42□□□□□ -0.42
Syn1O88935 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syn1O88935 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syn1O88935 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Syn1O88935 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.42□□□□□ -0.42
Syn1O88935 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syn1O88935 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syn1O88935 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.41□□□□□ -0.42
Syn1O88935 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syn1O88935 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syn1O88935 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syn1O88935 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.41□□□□□ -0.42
Syn1O88935 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms