Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm27390-201ENSMUST00000184516 176 ntBASIC12.75□□□□□ -0.37
Itgb3O54890 Gm28686-201ENSMUST00000187404 609 ntBASIC12.75□□□□□ -0.37
Itgb3O54890 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Gm18753-201ENSMUST00000201000 566 ntBASIC12.75□□□□□ -0.37
Itgb3O54890 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.75□□□□□ -0.37
Itgb3O54890 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.75□□□□□ -0.37
Itgb3O54890 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Itgb3O54890 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Itgb3O54890 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Itgb3O54890 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Itgb3O54890 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Itgb3O54890 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.74□□□□□ -0.37
Itgb3O54890 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Itgb3O54890 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Itgb3O54890 Gm13035-201ENSMUST00000117496 342 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 Gm15004-201ENSMUST00000119192 630 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.74□□□□□ -0.37
Itgb3O54890 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.74□□□□□ -0.37
Itgb3O54890 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.74□□□□□ -0.37
Itgb3O54890 Gm5369-201ENSMUST00000217499 588 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 Gm9797-202ENSMUST00000218003 294 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.74□□□□□ -0.37
Itgb3O54890 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.74□□□□□ -0.37
Itgb3O54890 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.74□□□□□ -0.37
Itgb3O54890 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Itgb3O54890 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Itgb3O54890 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Itgb3O54890 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Itgb3O54890 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Itgb3O54890 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Itgb3O54890 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Itgb3O54890 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.73□□□□□ -0.37
Itgb3O54890 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.73□□□□□ -0.37
Itgb3O54890 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Itgb3O54890 Gm14058-201ENSMUST00000116082 735 ntBASIC12.73□□□□□ -0.37
Itgb3O54890 Gm12857-201ENSMUST00000117678 592 ntBASIC12.73□□□□□ -0.37
Itgb3O54890 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.73□□□□□ -0.37
Itgb3O54890 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.73□□□□□ -0.37
Itgb3O54890 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.73□□□□□ -0.37
Itgb3O54890 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Itgb3O54890 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Itgb3O54890 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.73□□□□□ -0.37
Itgb3O54890 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms