Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.4□□□□□ -0.42
Sdc4O35988 Gm43947-201ENSMUST00000203019 959 ntBASIC12.4□□□□□ -0.42
Sdc4O35988 Gm44100-201ENSMUST00000204329 436 ntBASIC12.4□□□□□ -0.42
Sdc4O35988 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.4□□□□□ -0.42
Sdc4O35988 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.4□□□□□ -0.42
Sdc4O35988 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 Gm10288-201ENSMUST00000084614 537 ntBASIC12.4□□□□□ -0.42
Sdc4O35988 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.4□□□□□ -0.42
Sdc4O35988 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.4□□□□□ -0.42
Sdc4O35988 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Sdc4O35988 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc4O35988 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Sdc4O35988 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Sdc4O35988 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sdc4O35988 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.4□□□□□ -0.43
Sdc4O35988 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.39□□□□□ -0.43
Sdc4O35988 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Sdc4O35988 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sdc4O35988 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Sdc4O35988 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Gm7851-201ENSMUST00000117574 323 ntBASIC12.39□□□□□ -0.43
Sdc4O35988 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.39□□□□□ -0.43
Sdc4O35988 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.39□□□□□ -0.43
Sdc4O35988 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.39□□□□□ -0.43
Sdc4O35988 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Gm28686-201ENSMUST00000187404 609 ntBASIC12.39□□□□□ -0.43
Sdc4O35988 Gm18893-201ENSMUST00000198416 943 ntBASIC12.39□□□□□ -0.43
Sdc4O35988 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Gm1821-202ENSMUST00000227415 750 ntBASIC12.39□□□□□ -0.43
Sdc4O35988 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.39□□□□□ -0.43
Sdc4O35988 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc4O35988 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.38□□□□□ -0.43
Sdc4O35988 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.38□□□□□ -0.43
Sdc4O35988 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.38□□□□□ -0.43
Sdc4O35988 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sdc4O35988 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sdc4O35988 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Sdc4O35988 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.38□□□□□ -0.43
Sdc4O35988 Gm23251-201ENSMUST00000103773 110 ntBASIC12.38□□□□□ -0.43
Sdc4O35988 Gm23699-201ENSMUST00000158835 135 ntBASIC12.38□□□□□ -0.43
Sdc4O35988 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.38□□□□□ -0.43
Sdc4O35988 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.38□□□□□ -0.43
Sdc4O35988 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.38□□□□□ -0.43
Sdc4O35988 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms