Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm24990-201ENSMUST00000157406 323 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.77□□□□□ -0.53
Npc1O35604 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Npc1O35604 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.77□□□□□ -0.53
Npc1O35604 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm29615-201ENSMUST00000185371 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm28224-201ENSMUST00000186078 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm29001-201ENSMUST00000186177 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm28292-201ENSMUST00000186593 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm28101-201ENSMUST00000187608 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm29076-201ENSMUST00000187689 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm28302-201ENSMUST00000187931 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm28646-201ENSMUST00000188220 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm28205-201ENSMUST00000189177 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm29032-201ENSMUST00000189797 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm28695-201ENSMUST00000190300 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm37448-201ENSMUST00000192795 697 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Npc1O35604 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.77□□□□□ -0.53
Npc1O35604 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.77□□□□□ -0.53
Npc1O35604 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Npc1O35604 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.77□□□□□ -0.53
Npc1O35604 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.77□□□□□ -0.53
Npc1O35604 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.77□□□□□ -0.53
Npc1O35604 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.77□□□□□ -0.53
Npc1O35604 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Npc1O35604 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Npc1O35604 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.76□□□□□ -0.53
Npc1O35604 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.76□□□□□ -0.53
Npc1O35604 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.76□□□□□ -0.53
Npc1O35604 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.76□□□□□ -0.53
Npc1O35604 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.76□□□□□ -0.53
Npc1O35604 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Npc1O35604 Gm14028-201ENSMUST00000117434 479 ntBASIC11.76□□□□□ -0.53
Npc1O35604 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.76□□□□□ -0.53
Npc1O35604 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.76□□□□□ -0.53
Npc1O35604 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Npc1O35604 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Npc1O35604 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Gm44262-201ENSMUST00000204969 372 ntBASIC11.76□□□□□ -0.53
Npc1O35604 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.76□□□□□ -0.53
Npc1O35604 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.76□□□□□ -0.53
Npc1O35604 Gm18730-201ENSMUST00000218038 343 ntBASIC11.76□□□□□ -0.53
Npc1O35604 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.76□□□□□ -0.53
Npc1O35604 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.76□□□□□ -0.53
Npc1O35604 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.76□□□□□ -0.53
Npc1O35604 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.76□□□□□ -0.53
Npc1O35604 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Npc1O35604 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms