Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.55□□□□□ -0.4
Ebf3O08791 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ebf3O08791 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ebf3O08791 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ebf3O08791 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Gm15131-201ENSMUST00000119124 595 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 Gm12501-201ENSMUST00000119163 529 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.54□□□□□ -0.4
Ebf3O08791 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.54□□□□□ -0.4
Ebf3O08791 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.54□□□□□ -0.4
Ebf3O08791 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Gm19459-201ENSMUST00000176240 835 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 Mir7677-201ENSMUST00000184226 67 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.54□□□□□ -0.4
Ebf3O08791 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Gm21811-201ENSMUST00000096485 930 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.54□□□□□ -0.4
Ebf3O08791 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ebf3O08791 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ebf3O08791 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.54□□□□□ -0.4
Ebf3O08791 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ebf3O08791 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf3O08791 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ebf3O08791 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf3O08791 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf3O08791 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ebf3O08791 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Ebf3O08791 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.53□□□□□ -0.4
Ebf3O08791 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ebf3O08791 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Ebf3O08791 Gm23251-201ENSMUST00000103773 110 ntBASIC12.53□□□□□ -0.4
Ebf3O08791 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.53□□□□□ -0.4
Ebf3O08791 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.53□□□□□ -0.4
Ebf3O08791 Gm37246-201ENSMUST00000192665 835 ntBASIC12.53□□□□□ -0.4
Ebf3O08791 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.53□□□□□ -0.4
Ebf3O08791 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.53□□□□□ -0.4
Ebf3O08791 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.53□□□□□ -0.4
Ebf3O08791 Gm270-201ENSMUST00000223010 976 ntBASIC12.53□□□□□ -0.4
Ebf3O08791 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.53□□□□□ -0.4
Ebf3O08791 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf3O08791 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ebf3O08791 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf3O08791 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf3O08791 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Ebf3O08791 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf3O08791 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.52□□□□□ -0.4
Ebf3O08791 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf3O08791 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf3O08791 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf3O08791 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf3O08791 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf3O08791 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf3O08791 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf3O08791 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.52□□□□□ -0.4
Ebf3O08791 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf3O08791 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ebf3O08791 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf3O08791 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms