Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm18038-201ENSMUST00000197900 485 ntBASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Gm9996-201ENSMUST00000070359 913 ntBASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cfap99A0A140LIX9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cfap99A0A140LIX9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cfap99A0A140LIX9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Gm14058-201ENSMUST00000116082 735 ntBASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Gm13045-201ENSMUST00000119019 712 ntBASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Gm27390-201ENSMUST00000184516 176 ntBASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Gm19353-201ENSMUST00000184561 445 ntBASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Gm44545-201ENSMUST00000208262 746 ntBASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms