Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.04■□□□□ -0
Chmp5Q9D7S9 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Gm4984-201ENSMUST00000115987 360 ntBASIC15.03■□□□□ -0
Chmp5Q9D7S9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.03■□□□□ -0
Chmp5Q9D7S9 Gm13570-201ENSMUST00000140763 309 ntBASIC15.03■□□□□ -0
Chmp5Q9D7S9 Gm27023-201ENSMUST00000182372 285 ntBASIC15.03■□□□□ -0
Chmp5Q9D7S9 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC15.03■□□□□ -0
Chmp5Q9D7S9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC15.03■□□□□ -0
Chmp5Q9D7S9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Gm25261-201ENSMUST00000157416 134 ntBASIC15.02■□□□□ -0
Chmp5Q9D7S9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
Chmp5Q9D7S9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp5Q9D7S9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp5Q9D7S9 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.02□□□□□ -0.01
Chmp5Q9D7S9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp5Q9D7S9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp5Q9D7S9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp5Q9D7S9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.02□□□□□ -0.01
Chmp5Q9D7S9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Gm12058-201ENSMUST00000118614 437 ntBASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Gm24548-201ENSMUST00000158650 108 ntBASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 Gm40466-201ENSMUST00000212174 422 ntBASIC15.01□□□□□ -0.01
Chmp5Q9D7S9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms