Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm19165-201ENSMUST00000204453 1982 ntBASIC13.16□□□□□ -0.3
Ssr1Q9CY50 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssr1Q9CY50 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssr1Q9CY50 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssr1Q9CY50 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssr1Q9CY50 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ssr1Q9CY50 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ssr1Q9CY50 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssr1Q9CY50 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ssr1Q9CY50 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Gm11964-201ENSMUST00000120982 444 ntBASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr1Q9CY50 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ssr1Q9CY50 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gm12384-201ENSMUST00000119228 919 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gm27243-201ENSMUST00000183964 521 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gm44405-201ENSMUST00000198952 126 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gm6266-201ENSMUST00000203844 806 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.14□□□□□ -0.31
Ssr1Q9CY50 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr1Q9CY50 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.13□□□□□ -0.31
Ssr1Q9CY50 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr1Q9CY50 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr1Q9CY50 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr1Q9CY50 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ssr1Q9CY50 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr1Q9CY50 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr1Q9CY50 Gm11298-201ENSMUST00000120503 1799 ntBASIC13.13□□□□□ -0.31
Ssr1Q9CY50 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms