Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Gm9630-201ENSMUST00000178304 885 ntBASIC14.19□□□□□ -0.14
Hdac9Q99N13 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Gm17877-201ENSMUST00000192578 814 ntBASIC14.19□□□□□ -0.14
Hdac9Q99N13 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Gm43520-201ENSMUST00000197996 164 ntBASIC14.19□□□□□ -0.14
Hdac9Q99N13 Gm43852-201ENSMUST00000202098 917 ntBASIC14.19□□□□□ -0.14
Hdac9Q99N13 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Gm6867-201ENSMUST00000219165 425 ntBASIC14.19□□□□□ -0.14
Hdac9Q99N13 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac9Q99N13 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.18□□□□□ -0.14
Hdac9Q99N13 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.18□□□□□ -0.14
Hdac9Q99N13 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Gm3551-201ENSMUST00000190750 664 ntBASIC14.18□□□□□ -0.14
Hdac9Q99N13 Gm37028-201ENSMUST00000194276 107 ntBASIC14.18□□□□□ -0.14
Hdac9Q99N13 Gm38117-201ENSMUST00000194653 939 ntBASIC14.18□□□□□ -0.14
Hdac9Q99N13 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Gm44506-201ENSMUST00000206278 965 ntBASIC14.18□□□□□ -0.14
Hdac9Q99N13 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac9Q99N13 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.17□□□□□ -0.14
Hdac9Q99N13 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.17□□□□□ -0.14
Hdac9Q99N13 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.17□□□□□ -0.14
Hdac9Q99N13 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.17□□□□□ -0.14
Hdac9Q99N13 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac9Q99N13 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac9Q99N13 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms