Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scrt1Q99M85 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Scrt1Q99M85 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Scrt1Q99M85 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.62□□□□□ -0.71
Scrt1Q99M85 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Scrt1Q99M85 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scrt1Q99M85 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scrt1Q99M85 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.62□□□□□ -0.71
Scrt1Q99M85 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Scrt1Q99M85 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scrt1Q99M85 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scrt1Q99M85 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.61□□□□□ -0.71
Scrt1Q99M85 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.61□□□□□ -0.71
Scrt1Q99M85 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm25517-201ENSMUST00000083865 134 ntBASIC10.61□□□□□ -0.71
Scrt1Q99M85 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.61□□□□□ -0.71
Scrt1Q99M85 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.61□□□□□ -0.71
Scrt1Q99M85 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Scrt1Q99M85 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm12795-201ENSMUST00000117594 539 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm15573-201ENSMUST00000119487 540 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm27530-201ENSMUST00000184096 98 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms