Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm6963-201ENSMUST00000147879 379 ntBASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Gm26361-201ENSMUST00000158868 186 ntBASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm14644-201ENSMUST00000116671 647 ntBASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm13296-201ENSMUST00000117854 997 ntBASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm38241-201ENSMUST00000192641 898 ntBASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm32999-201ENSMUST00000192693 562 ntBASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm45598-202ENSMUST00000210719 986 ntBASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gzmn-202ENSMUST00000225535 989 ntBASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdha3Q91Y16 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdha3Q91Y16 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms