Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Gm13182-201ENSMUST00000122241 312 ntBASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Gm8459-201ENSMUST00000162504 760 ntBASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Gm9192-201ENSMUST00000183221 985 ntBASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Gm29155-201ENSMUST00000185910 269 ntBASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Gm28324-201ENSMUST00000187913 264 ntBASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Gm6450-201ENSMUST00000200896 574 ntBASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc44a4Q91VA1 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm11783-201ENSMUST00000119549 885 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm7150-201ENSMUST00000122032 981 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm44158-201ENSMUST00000203881 505 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm2875-201ENSMUST00000211333 360 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm7940-201ENSMUST00000218195 769 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Slc44a4Q91VA1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Gm12516-201ENSMUST00000120819 385 ntBASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc44a4Q91VA1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms