Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm13263-201ENSMUST00000121271 838 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm8199-201ENSMUST00000121323 823 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Mir3547-201ENSMUST00000175461 88 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm9555-201ENSMUST00000200908 583 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 AC154646.1-201ENSMUST00000225011 1092 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm1821-202ENSMUST00000227415 750 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.93□□□□□ -0.34
TraipQ8VIG6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gm13809-201ENSMUST00000117921 597 ntBASIC12.92□□□□□ -0.34
TraipQ8VIG6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gm22334-201ENSMUST00000158070 133 ntBASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gm8815-201ENSMUST00000173809 620 ntBASIC12.92□□□□□ -0.34
TraipQ8VIG6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.92□□□□□ -0.34
TraipQ8VIG6 Ginm1-202ENSMUST00000065124 300 ntBASIC12.92□□□□□ -0.34
TraipQ8VIG6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.92□□□□□ -0.34
TraipQ8VIG6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.92□□□□□ -0.34
TraipQ8VIG6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TraipQ8VIG6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TraipQ8VIG6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms