Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm13786-201ENSMUST00000122371 333 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm16296-201ENSMUST00000159905 325 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm29396-201ENSMUST00000185659 716 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm38266-201ENSMUST00000194931 421 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm42599-201ENSMUST00000201308 469 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm45331-201ENSMUST00000209868 554 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm22058-201ENSMUST00000083393 310 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.68□□□□□ -0.54
Rnf8Q8VC56 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Gm3961-201ENSMUST00000204425 994 ntBASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Gm7046-201ENSMUST00000221351 977 ntBASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf8Q8VC56 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf8Q8VC56 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf8Q8VC56 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf8Q8VC56 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rnf8Q8VC56 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf8Q8VC56 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf8Q8VC56 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.66□□□□□ -0.54
Rnf8Q8VC56 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms