Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Gm6912-201ENSMUST00000117218 544 ntBASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Gm24420-201ENSMUST00000176676 59 ntBASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Mir8102-201ENSMUST00000184148 139 ntBASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Mir7023-201ENSMUST00000185093 64 ntBASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccdc9Q8VC31 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Gm4875-201ENSMUST00000118257 786 ntBASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc9Q8VC31 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Gm27989-201ENSMUST00000184721 107 ntBASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc9Q8VC31 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms