Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Rprl1-201ENSMUST00000158050 327 ntBASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Gm38341-201ENSMUST00000195357 515 ntBASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ubqln1Q8R317 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ubqln1Q8R317 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ubqln1Q8R317 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ubqln1Q8R317 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ubqln1Q8R317 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ubqln1Q8R317 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ubqln1Q8R317 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Ubqln1Q8R317 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ubqln1Q8R317 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm14644-201ENSMUST00000116671 647 ntBASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm14109-201ENSMUST00000118814 309 ntBASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm14381-201ENSMUST00000122105 414 ntBASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm27046-201ENSMUST00000182160 463 ntBASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm9230-201ENSMUST00000188228 532 ntBASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Gm19994-201ENSMUST00000217086 586 ntBASIC11.45□□□□□ -0.58
Ubqln1Q8R317 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Ubqln1Q8R317 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubqln1Q8R317 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ubqln1Q8R317 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms