Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm15236-201ENSMUST00000117309 379 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm14208-201ENSMUST00000119645 678 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm14277-201ENSMUST00000121195 360 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm14017-201ENSMUST00000121934 386 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm24749-201ENSMUST00000157838 343 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm27627-201ENSMUST00000183644 150 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm2260-201ENSMUST00000184965 657 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm29615-201ENSMUST00000185371 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm28224-201ENSMUST00000186078 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm29001-201ENSMUST00000186177 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm28292-201ENSMUST00000186593 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm28101-201ENSMUST00000187608 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm29076-201ENSMUST00000187689 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm28302-201ENSMUST00000187931 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm28646-201ENSMUST00000188220 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm28205-201ENSMUST00000189177 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm29032-201ENSMUST00000189797 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm28695-201ENSMUST00000190300 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm37448-201ENSMUST00000192795 697 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm43962-201ENSMUST00000203898 190 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vmn1r28Q8R2C9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Vmn1r28Q8R2C9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Gm29199-201ENSMUST00000187766 775 ntBASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Vmn1r28Q8R2C9 Paupar-201ENSMUST00000194826 3482 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms