Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynpoQ8CC35 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynpoQ8CC35 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SynpoQ8CC35 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SynpoQ8CC35 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.71□□□□□ -0.53
SynpoQ8CC35 Gm14760-201ENSMUST00000121831 999 ntBASIC11.71□□□□□ -0.53
SynpoQ8CC35 Gm26361-201ENSMUST00000158868 186 ntBASIC11.71□□□□□ -0.53
SynpoQ8CC35 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Gm9630-201ENSMUST00000178304 885 ntBASIC11.71□□□□□ -0.53
SynpoQ8CC35 Gm2260-201ENSMUST00000184965 657 ntBASIC11.71□□□□□ -0.53
SynpoQ8CC35 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.71□□□□□ -0.53
SynpoQ8CC35 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.71□□□□□ -0.53
SynpoQ8CC35 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.71□□□□□ -0.54
SynpoQ8CC35 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.71□□□□□ -0.54
SynpoQ8CC35 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SynpoQ8CC35 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
SynpoQ8CC35 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Gm14277-201ENSMUST00000121195 360 ntBASIC11.7□□□□□ -0.54
SynpoQ8CC35 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Gm24990-201ENSMUST00000157406 323 ntBASIC11.7□□□□□ -0.54
SynpoQ8CC35 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Mir7070-201ENSMUST00000183657 86 ntBASIC11.7□□□□□ -0.54
SynpoQ8CC35 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.7□□□□□ -0.54
SynpoQ8CC35 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.7□□□□□ -0.54
SynpoQ8CC35 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.7□□□□□ -0.54
SynpoQ8CC35 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.7□□□□□ -0.54
SynpoQ8CC35 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SynpoQ8CC35 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynpoQ8CC35 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms