Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Gm38117-201ENSMUST00000194653 939 ntBASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Gm19287-201ENSMUST00000203190 358 ntBASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.94□□□□□ -0.18
Shisa4Q8CA71 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa4Q8CA71 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Gm7851-201ENSMUST00000117574 323 ntBASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Gm15595-201ENSMUST00000120840 961 ntBASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Gm6407-201ENSMUST00000176468 549 ntBASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa4Q8CA71 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Gm9062-201ENSMUST00000117712 727 ntBASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Gm11660-201ENSMUST00000120955 412 ntBASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Gm38314-201ENSMUST00000195709 625 ntBASIC13.92□□□□□ -0.18
Shisa4Q8CA71 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Gm8285-201ENSMUST00000208293 759 ntBASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shisa4Q8CA71 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shisa4Q8CA71 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Shisa4Q8CA71 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shisa4Q8CA71 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shisa4Q8CA71 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shisa4Q8CA71 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shisa4Q8CA71 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms