Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm15515-201ENSMUST00000117827 822 ntBASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm23958-201ENSMUST00000157207 105 ntBASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim47Q8C0E3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Gm14542-201ENSMUST00000118460 1248 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Mir7677-201ENSMUST00000184226 67 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Gm18351-201ENSMUST00000188646 883 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Gm26448-201ENSMUST00000082446 203 ntBASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim47Q8C0E3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm23596-201ENSMUST00000104304 132 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm22885-201ENSMUST00000157410 107 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms