Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gm22323-201ENSMUST00000103832 109 ntBASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gm14381-201ENSMUST00000122105 414 ntBASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Rprl1-202ENSMUST00000198476 238 ntBASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gm43179-201ENSMUST00000198797 275 ntBASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gm45331-201ENSMUST00000209868 554 ntBASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trub1Q8C0D0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Gm38241-201ENSMUST00000192641 898 ntBASIC12.41□□□□□ -0.42
Trub1Q8C0D0 AA914427-201ENSMUST00000193194 1166 ntBASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Gm37259-201ENSMUST00000193903 849 ntBASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trub1Q8C0D0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trub1Q8C0D0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms