Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Gm8385-201ENSMUST00000058999 643 ntBASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Aph1aQ8BVF7 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gm2260-201ENSMUST00000184965 657 ntBASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Aph1aQ8BVF7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Gm14277-201ENSMUST00000121195 360 ntBASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 AY036118-201ENSMUST00000200021 923 ntBASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Aph1aQ8BVF7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms