Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Gm27390-201ENSMUST00000184516 176 ntBASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Gm5996-201ENSMUST00000211110 718 ntBASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Gm45856-201ENSMUST00000212752 416 ntBASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 Gm42941-201ENSMUST00000200347 1321 ntBASIC15.53■□□□□ 0.08
Col16a1Q8BLX7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Col16a1Q8BLX7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Gm13445-201ENSMUST00000121664 307 ntBASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Gm8451-201ENSMUST00000170338 447 ntBASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Gm9507-202ENSMUST00000180157 654 ntBASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Gm7741-201ENSMUST00000181445 989 ntBASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Gm7536-201ENSMUST00000077389 444 ntBASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Gm5453-201ENSMUST00000080866 447 ntBASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col16a1Q8BLX7 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gm5555-201ENSMUST00000120352 1111 ntBASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gm37852-201ENSMUST00000193027 350 ntBASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gm43671-201ENSMUST00000200422 433 ntBASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms